Microbiology Test Part 1
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You are asked to speak to a 27 year old patient who is pregnant for the first time. She is concerned as her friend recently gave birth and the baby was found to have profound hearing loss. Her friend was told this was due to an infection whilst she was pregnant. What is the most common infective cause of congenital hearing loss?
Explanation: CMV is the most common congenital infection causing sensorineural deafness
2) What epithelium cell type lines the ureters?
Explanation: See the table below for a summary of the types of epithelium
3) Which of the following is a double stranded RNA virus?
Explanation: As can be seen from the table RNA viruses are almost always single stranded whilst DNA viruses are almost always double stranded. The exceptions are rotavirus and Parvovirus B19 respectively.
What is the approximate risk of HIV transmission during a single episode of vaginal unprotected sexual intercourse with a known HIV positive person?
Explanation: The table below shows the approximate risk of HIV transmission following a sexual exposure. Obviously individual circumstances such as viral load, bleeding and co‐existent STIs may increase an individuals risk.
5) What is the incubation period for CMV?
Explanation: The incubation period for CMV is 3‐12 weeks
6) What is the prevalence of HIV in the UK obstetric population?
Explanation: The overall rate is 2 per 1000.
A 29 year old patient who is 22 weeks pregnant seeks your advice as she was recently exposed to chickenpox. Regarding fetal varicella syndrome (FVS) which of the following statements is correct regarding maternal varicella infection?
Explanation: Congenital fetal varicella syndrome may occur if there is maternal varicella infection (chickenpox) during the 1st 20 weeks of gestation. The risk of FVS to babies born to mothers who have chickenpox during the first 20 weeks gestation is 0.4% (1‐12 weeks) ‐2.0% (13‐20 weeks). If a mother has chickenpox in late pregnancy (5 days prior to delivery) then there is risk of neonatal varicella infection which may be severe.
A 35 year old lady is seen in clinic for IVF counselling. She reports having bloody watery diarrhoea for the past 5 days and a fever up to 39oC. A day or two earlier she had takeaway chicken that tasted "funny". Which gram negative rod is likely to be responsible?
Explanation: In the developed world Campylobacter jejuni is the primary cause of bacterial gastroenteritis. Typically food borne and half the cases are related to poultry. Species can be aerobic or anaerobic. The question may have said "spiral shaped rod". If this is the case you know you are dealing with compylobacter or helicobacter!
9) HPV genotypes 6 and 11 are associated with which of the following?
Explanation: MCV 1 pox virus is a type of molluscm Herpes simplex causes herpes eruptions Streptococcus pyogenes causes Scarlet Fever Parvovirus causes slapped cheek
You are asked to see a 42 year old women due to pelvic pain and PV discharge. She had IUCD fitted for emergency contraception 4 years ago. You send swabs. The microscopy reveals sulphur granules. What is the likely causative organism?
Explanation: Actinomyces is rare but it is an old exam favourite. If the question mentions sulphur think Actinomyces! Pelvic actinomycosis is predominantly associated with intrauterine contraceptive devices (IUCDs). It usually presents with a history of prolonged use (>2 years) and symptoms of fever, vaginal discharge, pelvic or abdominal pain, and weight loss.
11) What family of virus does Rubella belong to?
Explanation: Rubella is a type of Togavirus. It should be noted that when using virus terminology (taxon structure) the suffix changes according to the level of order. Although in most texts the family of viruses will be written as togavirus using its appropriate suffix it may be termed togaviridae.
You are asked to see a 33 year old women who is 16 weeks pregnant. She complains of frothy yellow vaginal discharge and vaginal soreness. A wet smear is sent and microscopy reveals Trichomoniasis. What percentage of women with trichomoniasis infection have the classic frothy yellow PV discharge?
Explanation: Vaginal discharge occurs in up to 70% of cases. Only 20% will have the classic frothy yellow discharge. Note the RCOG and BASHH both state up to 70% of women will have vaginal discharge. Its worth bearing this in mind if you are asked about what % of women have vaginal discharge and you are aware 50% are asymptomatic as the numbers don't quite add up!
13) What is the primary causative organism in Bacterial Vaginosis?
Explanation: Gardneralla vaginalis is the primary causative organism. It is thought to be polymicobial with several other species contributing that may include: Lactobacillus, Prevotella, Mobiluncus, Bacteroides, Peptostreptococcus, Fusobacterium,Veillonella, Eubacterium, Mycoplasma hominis, Ureaplasma urealyticum, and Streptococcus viridans.
14) What is the primary host for Toxoplasma Gondii?
Explanation: T. gondii oocysts are excreted in cat faeces. They are then ingested by secondary hosts. Secondary hosts include humans, cattle, sheep, pigs, rodents and birds.
15) Which of the following is a DNA virus?
Explanation: Hepatitis B is a DNA virus. All the others are RNA viruses
You are asked to review a 24 year old women in A&E. She delivered by C‐section following failed vaginal delivery 3 weeks earlier. She complains of lower abdominal and renal angle pain and has also noticed an offensive smelling vaginal discharge over the past 2‐3 days. Her observations are: T: 38.1°C BP: 100/60 HR: 92 RR 20 She tells you she is not breastfeeding and has no known drug allergies. What is the most appropriate option regarding her antimicrobial management?
Explanation: This patient has a number of risk factors and red flag signs of puerperal sepsis. She should have antibiotic therapy started promptly (take blood cultures but do not await the results). Intravenous piperacillin and tazobactam is suggested by the RCOG. Cefuroxime wouldn't usually be used alone (typically metronidazole given for anaerobic cover) and the RCOG notes its association with C.difficile infection thus it is no longer 1st line.
Risk Factors for Puerperal Sepsis Obesity Impaired glucose tolerance / diabetes Impaired immunity / immunosuppressant medication Anaemia Vaginal discharge History of pelvic infection Amniocentesis and other invasive procedures Cervical cerclage PROM Vaginal trauma, caesarean section, wound haematoma Retained products of conception GAS infection in close contacts / family members Black or minority ethnic group origin
17) What is the causative organism of Toxoplasmosis?
Explanation: T.Gondii causes Toxoplasmosis Borrelia causes Lyme Disease. Treponema pallidum causes syphilis
18) Which group of beta haemolytic streptococci is associated with chorioamnioitis?
Explanation: Chorioamnionitis is a complication of pregnancy caused by bacterial infection of the fetal amnion and chorion membranes. Group B Streptococcus is associated with chorioamnioitis
19) Regarding the image of the oocyte below what is the name given to the part labelled F
Explanation: F = Zona Pellucida The Zona Pellucida (ZP) is a glycoprotein layer that is adjacent to the Corona Radiata (the outermost layer consisting of follicular cells). The Perivitelline space is the space between the ZP and the cell membrane (or Vitelline membrane). The Perivitelline space and cell membrane are both deep to The Corona Radiata and Zona Pellucida
What percentage of women develop antibodies to Human Papilloma Virus (HPV) following infection?
Explanation: According to the RCOG only 50‐60% of female patients produce an antibody response to HPV following infection.
21) What is the incubation period for Rubella?
Explanation: The incubation period for Rubella is 12‐23 days
22) Which of the following is a single stranded DNA virus?
A 24 year old female patient undergoes an STI screen due to development of dysuria 5 days earlier. The results are positive for chlamydia infection. With regard to contact tracing what is the recommended action regarding tracing and informing sexual partners in this case?
Explanation: Recommended contact tracing from the SIGN guidance advises: Sexual partners past 4 weeks for symptomatic male patients Sexual partners past 6 months for asymptomatic men and all female patients or last sexual partner if >6 months.
What is the tubal factor infertility rate following a single episode of Pelvic Inflammatory disease?
Explanation: Pelvic Inflammatory disease PID Key Facts Can be caused by a number of organisms Chlamydia and Gonorrhoea thought to account for around 25‐50% of cases Tubal infertility rate following 1 episode PID 12% Tubal infertility rate following 3 episodes PID 50%
25) Which of the following describes Toxoplasma Gondii?
Explanation: T Gondii is an intracellular protozoan
A 32 year old patient develops painful ulcerated genital lesions and inguinal lymphadenopathy. She is 32 weeks pregnant. You suspect genital herpes and send swabs. Which of the following is appropriate management according to the 2014 BASHH/RCOG guidelines?
Explanation: Although aciclovir should be given, this patient is in the 3rd trimester so the course should continue until delivery. Dose will be 400mg TDS unless disseminated disease. If this is a primary HSV infection (This should be confirmed by lesion swabs to confirm HSV infection and bloods to check no antibody response i.e. evidence previous infection) then C‐ section is indicated.
27) Which of the following is an RNA virus?
Explanation: As HIV is a retrovirus and sometimes not classed as a true RNA virus you are unlikely to be asked about its viral classification in these terms. You will be expected to know it is a retrovirus. Therefore the hepatitis viruses (excluding hep B) and Rubella are the key RNA viruses to be aware of.
A 24 year old patient who is 14 weeks pregnant has her urine dipped during an antenatal visit. This shows leucocytes ++ and nitrites ++. You suspect a UTI and send a urine sample for culture. According to NICE guidance which of the following is most appropriate treatment option?
Explanation: Urinary Tract Infection In Pregnancy NICE guidance on UTI in pregnancy was updated in July 2015 The following is advised: Send urine for culture and sensitivity from all women in whom UTI is suspected before starting empirical antibiotics and 7 days after antibiotic treatment is completed. Prescribe an antibiotic to all women with suspected UTI (awaiting culture result is not advised) Although local antibiotic resistance needs to be taken into account the following is advised in terms of antibiotic selection: 1. Nitrofurantoin 50 mg QDS (or 100 mg MR BD) for 7 days. 2. Trimethoprim 200 mg twice daily, for 7 days Give folic acid 5 mg OD if it is the 1st trimester Do not give trimethoprim if the woman is folate deficient, taking a folate antagonist, or has been treated with trimethoprim in the past year.
A 26 year old patient known to have Group B Streptococcus (GBS) on vaginal swab is being admitted for elective C‐section delivery. She is penicillin allergic. What intrapartum antiobiotic treatment is advised?
Explanation: The greentop guideline (No 36) states: Antibiotic prophylaxis for GBS is not required for women undergoing planned caesarean section in the absence of labour and with intact membranes. If Intrapartum antibiotics for GBS are indicated 3g Benzylpenicillin should be administered as soon as possible after the onset of labour and 1.5g 4 hourly until delivery. Clindamycin 900mg should be administered to those women allergic to Benzylpenicillin
According to the UK NSC and NICE which of the following should NOT be screened for during routine antenatal care?
Explanation: Antenatal Infection Screening Antenatal Infection Screening Key Points The UK National Screening Committee (UK NSC) currently recommends routine antenatal screening for the following 3 infectious diseases: HIV Hepatitis B Syphilis *It is also now advised an MSU should be offered to test for asymptomatic bacteriuria This is backed up by NICE guidance who advise routine screening should NOT be offered for the following: Chlamydia (though under 25s should be directed to a local screening program) CMV Hepatitis C Group B streptococcus Toxoplasmosis
A 24 year old patient decides to take a Chlamydia screening test whilst in the GP surgery. He is asymptomatic. The results are positive for chlamydia infection. His partner attends for testing and wants to know the risk of contracting Chlamydia. What is the risk of chlamydia infection following intercourse with an asymptomatic chlamydia positive partner?
Explanation: Approximately 2/3 of people who have sexual intercourse with an asymptomatic chlamydia positive partner will contract Chlamydia.
A patient has been referred to clinic following diagnosis of a Gumma. What stage of syphilis infection is this?
33) HPV genotypes 6 and 11 are associated with which of the following?
34) Which of the following describes Neisseria Gonorrhoeae?
Explanation: Neisseria Gonorrhoeae (and Neisseria Meningitidis which causes meningococcal septicaemia) are gram negative diplococci.
A 26 year old patient known to have Group B Streptococcus (GBS) on vaginal swab is going into labour. A normal vaginal delivery is planned. She is penicillin allergic. What intrapartum antiobiotic treatment is advised?
Explanation: The greentop guideline (No 36) 3g Benzylpenicillin should be administered as soon as possible after the onset of labour and 1.5g 4 hourly until delivery. Clindamycin 900mg should be administered to those women allergic to benzylpenicillin Antibiotic prophylaxis for GBS is not required for women undergoing planned caesarean section in the absence of labour and with intact membranes
36) HPV genotypes 6 and 11 are associated with which of the following?
Explanation: 6 and 11 are considered low risk and are commonly associated with genital warts and low‐grade squamous intraepithelial lesions of the cervix (can correspond cytologically to CIN 1)
37) Which of the following is the causative organism in Syphilis infection?
Explanation: Treponoma Pallidum is a Spirochaete bacterium and the causative organism in Syphiis
38) In type 2 necrotising fasciitis what is the most likely causative organism?
Explanation: There are 2 types of necrotising fasciitis Type 1: Polymicrobial (65% of cases) Type 2: Monomicrobial (35% of cases) The most common causative organism is Group A streptococcus (streptococcus pyogenes). Management is surgical debridement and antibiotic therapy
Clostridium perfringens causes gas gangrene Clostridia Tetani causes tetanus
When is the highest risk of maternal‐fetal transmission of Toxoplasma Gondii during pregnancy?
Explanation: The risk of transplacental transmission from mother to fetus is greater in later pregnancy i.e. 26‐40 weeks.
Although the risk of transmission is lower in early pregnancy, if infection does occur earlier, particularly before 10 weeks, then complications are typically more severe.
40) Regarding the image of the oocyte below what is the name given to the part labelled A
Explanation: A = Corona Radiata It is formed by follicle cells adhering to the oocyte before it leaves the follicle. The origin of the cells are squamous granulosa cells. The Corona Radiate is typically represented
diagrammatically as a single layer, it is in fact the innermost layer of the cumulus oophorus. Sperm release hyaluronidase enzyme from their acrosome to disperse the corona radiata to penetrate the Zona Pellucid
41) What virus family does HIV belong to?
Explanation: HIV is a retrovirus i.e. a member of the retroviridae family. Its genus is lentivirus Rubella is a Togavirus Herpes Simplex and CMV are members of Herpesviridae family Parvovirus B19 (slapped cheek) is a member of the Parvoviridae family Hepatitis C is a member of the Flaviviridae family
The RCOG define septic shock as the persistence of hypoperfusion despite adequate fluid replacement therapy. What is the mortality rate in patients with septic shock?
Explanation: Septic shock has a very high mortality rate of 60%
According to the UK NSC and NICE which of the following should be screened for during routine antenatal care?
Explanation: According to the UK NSC and NICE which of the following should be screened for during routine antenatal care?
44) What type of virus is the Rubella virus?
Explanation: Rubella virus is the only member of the genus Rubivirus and is a type of Togavirus (Togaviridae). It is a single stranded RNA virus. Note for the exam if you are unsure ‐ most RNA viruses encountered in clinical practice are single stranded. The exception is rotavirus which is dsRNA virus. RNA viruses that use DNA during their replication are classed as retroviruses (HIV is an example)
You are asked to review a patient in ITU. They have undergone extensive tissue debridement for gas gangrene. What is the causative organism of gas gangrene?
Explanation: Group A streptococcus (streptococcus pyogenes) is the most common causative organism in necrotizing fasciitis. Clostridium perfringens causes gas gangrene. Clostridia is soil borne. Gas gangrene can develop following contamination of open wounds. It usually progresses rapidly and has a poor prognosis. Clostridia Tetani causes tetanus Staphylococcus aureus can cause a number of soft tissue infections e.g. cellulitis, wound infection.
46) HPV genotypes 6 and 11 are associated with which of the following?
Which of the following infections is most commonly associated with an increased risk of ectopic pregnancy?
Explanation: PID may be caused by a number of organisms but Chlamydia is by far the most common. Previous chlamydia infection is thought to increase the risk of ectopic by 2‐3 times.
48) Which species of candida is the most common cause of genital candida infection in pregnancy?
Explanation: Candida albicans is responsible for 90% of candida infections.
Which of the following is the most common cause of abnormal vaginal discharge in patients of childbearing age?
Explanation: Bacterial vaginosis is the most common cause of abnormal PV discharge
50) Which of the following is a gram positive obligate anaerobe?
Explanation: Almost all clinically relevant gram positive bacteria are facultative i.e. they can thrive in environments with or without Oxygen. If you are asked about a gram positive obligate anaerobe the answer should be Clostridia. Conversely if you are asked about a gram‐negative obligate anaerobe the answer should be Bacteroides (recently renamed Prevotella). NoteSome texts may quote Actinomyces as obligate anaerobes but in reality they are facultatively anaerobic with the exception of Actinomyces meyeri (obligate anaerobe). Sometimes even exam setters get it wrong and may refer to Actinomyces as obligate anaerobes. If you are asked about Actinomyces the question will usually have a reference to sulphur granules or reference a patient who has had an IUD for >2yrs.
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